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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885497.1_cds_XP_016439517.1_35065
CDS Infomation

[gene=LOC107765393] [db_xref=GeneID:107765393] [protein=proline-rich receptor-like protein kinase PERK1] [protein_id=XP_016439517.1] [location=complement(join(3584..3746,3894..4051,7824..7971,8521..8606,8929..8999,9855..9941,10852..11343,12639..13194))] [gbkey=CDS]
Sequence

ATGCCTTCACATTCACCGCCACCGTCACCTTCACCTTCTCCCGCATCTCCACAGCCGGAA
GGTGAAAATGGTATTACTTTTCCACCACTATATTCAACAGCCACTCCTAAACCGCCGCCA
GCAGTCGTGAACTTTTCACTTTCACAACCAGCGCCATCGCCGGCTCCACTATCCACGGAC
GTGGCATCGAAGCCAATATTTGAGCCTATTGATTACAAAGTAGCTTTACAACCACCACCG
CCGGCAATATTTACTCCTCCGTTACCTACGCCTATTCCGGTACTTTCAACACCGCCGCCT
CCAGTAACGGCGTTTTCGTTTCCTGCAAATGATTCGTCAACACCAGTTTCTGATGAAACC
TCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTTAAAGTTCACTCGTCGTCAAGTACATCA
GTCGGAGGAGTAATTGGAATTTCTGTAGGCATCACCGGAGCTTTCTTCATTGTTGCTGTA
GTAATACTTTTCGTTTGTTACAGGAATAAGATTAAAAATGGAAAATTACACGATCATGAA
TCTCCACGGCAAAAAGATGACTTGTACCATGATCTGCGTCAAAGTTTTAAACAGCATAAT
GCAGCAAATGGTTCTCCTGTTTCCCCCAAGCAAGTGATACCCTTCCGCCCACTTCACTGC
TTTGACAACAATGCTCATTCCAATTCCAATAATTTAGATGTTGAAACTCGTTTTTCACCA
AAAGACCACATAGCTGTTTTGGGTGGCAATTTCACATATGAAGAGCTGTGGTCAGCAACT
AGTGGATTCTCTACGTCCAACCTTCTAGGTGAGGGTGGATTTGGGTATGTGCACAAAGGA
GTCCTTCCTACAGGAAGAGAGATAGCAGTTAAACAGTTGAAGATTGGTAGCCATCAAGGG
GAGCGTGAATTTCAAGCAGAAGTAGAGACTATTAGCCGAGTGCACCATAAACATCTTGTC
TCTTTGGTTGGATACTGCATGACAGGAGTAAAGAGGTTGCTTTTTTATGAATTTGTTCCC
AACAGGACCTTAGAATATCATTTACATGGGGCAGCACAGTCCTTTATGGAATGGGCATCT
AGAATAAAAATTGCTATAGGATCAGCCAAAGGATTGGCATATCTGCATGAAGACTGTAAC
CCCACTATCATTCATCTTGATATCAAAGCAGCTAATATTCTTCTTGATTCTAACTTTGAA
GCTAAGGTTGCTGACTTTGGACTTGCCAAGTTCTTATCTGATTCAAACCACCATATTAGT
CATGTCTCCACTAGAGTGGTGGGAACTTTCGGGTATCTGGCCCCAGAGTATGCACAGAGT
GGAAAGGCCTCAGATAAGTCGGACATCTTCTCCTTTGGGGTTATGCTTCTGGAGTTAATT
ACAGGGCGTCCGCCTATAATCTCAACTGAATCCTCAGCATGCAGCAGTTTGGTCATCTGG
GCAAGGCCTTTGCTTAGAAGAACATTGGAAGATGGAAACTTTGACTCTTTAGTGGATCCA
TGTCTAGGACAAAATTACAATGGTGAAGAGATGGCTAACATGGTTGCTTGTGCTGCTGCT
TGTGTACGCCATTCATCATGGAAAAGACCACGGATGAGTCAGGTAGTTCGTGCTTTAGAA
GGTGAAGCTTCTCTCCTGGACCTTGATGAGGAAAATAGACCAGGACAGAGTACAGTTTTT
GACTATGATTCTGATGGAAGATTTTTTTTTAAGAATTTAAGCAAATCCAGCACAGCATTG
GGAAGTCAAAAGAAATGGTAA

Peptide Sequence

PEP ID

XP_016439517.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK1 [Nicotiana tabacum]
Sequence

MPSHSPPPSPSPSPASPQPEGENGITFPPLYSTATPKPPPAVVNFSLSQPAPSPAPLSTD
VASKPIFEPIDYKVALQPPPPAIFTPPLPTPIPVLSTPPPPVTAFSFPANDSSTPVSDET
SPPPPPPPPPLKVHSSSSTSVGGVIGISVGITGAFFIVAVVILFVCYRNKIKNGKLHDHE
SPRQKDDLYHDLRQSFKQHNAANGSPVSPKQVIPFRPLHCFDNNAHSNSNNLDVETRFSP
KDHIAVLGGNFTYEELWSATSGFSTSNLLGEGGFGYVHKGVLPTGREIAVKQLKIGSHQG
EREFQAEVETISRVHHKHLVSLVGYCMTGVKRLLFYEFVPNRTLEYHLHGAAQSFMEWAS
RIKIAIGSAKGLAYLHEDCNPTIIHLDIKAANILLDSNFEAKVADFGLAKFLSDSNHHIS
HVSTRVVGTFGYLAPEYAQSGKASDKSDIFSFGVMLLELITGRPPIISTESSACSSLVIW
ARPLLRRTLEDGNFDSLVDPCLGQNYNGEEMANMVACAAACVRHSSWKRPRMSQVVRALE
GEASLLDLDEENRPGQSTVFDYDSDGRFFFKNLSKSSTALGSQKKW

Transcript Sequence

Gene sequence data has not been registered.